STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iamIsoamylase precursor; Belongs to the glycosyl hydrolase 13 family. (778 aa)    
Predicted Functional Partners:
GLE_0338
Alpha,alpha-phosphotrehalase.
 
 
 0.820
amyA
Cyclomaltodextrin glucanotransferase.
 
 0.764
pgmB
Beta-phosphoglucomutase.
    
 0.664
GLE_4029
Glycosyltransferase family 36.
    
 0.651
GLE_2478
Hypothetical protein.
   
    0.559
nnrE
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
    0.548
galU
UTP-glucose-1-phosphate uridylyltransferase.
     
 0.534
GLE_0254
Phosphomannomutase.
    
 0.515
GLE_3654
Glycosyl hydrolase, family 31.
     
 0.509
otsA
Alpha,alpha-trehalose-phosphate synthase.
 
   
 0.470
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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