STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
regAPhotosynthetic apparatus regulatory protein RegA. (193 aa)    
Predicted Functional Partners:
GLE_2372
Histidine kinase.
  
 0.995
GLE_2201
Histidine kinase.
 0.989
GLE_2202
DNA-binding response regulator.
  
  
 
0.917
regA-2
Photosynthetic apparatus regulatory protein RegA.
  
  
 
0.915
GLE_2373
Exported SurF1-family protein.
 
     0.856
GLE_0632
Sensory box histidine kinase.
 
 
 0.777
GLE_0164
Sensory box histidine kinase.
   
 0.668
GLE_1142
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.576
GLE_1143
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.576
cyoD
Cytochrome o ubiquinol oxidase subunit IV.
 
     0.575
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: high (90%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.