STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2381Twin-arginine translocation pathway signal protein. (532 aa)    
Predicted Functional Partners:
GLE_3097
Glycerophosphoryl diester phosphodiesterase family.
 
 0.864
folE
GTP cyclohydrolase I.
    
 0.858
folB
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.840
GLE_1439
Intestinal alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
 
 0.761
GLE_4402
Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
 
 0.761
GLE_3096
Hypothetical protein.
 
 
 0.609
GLE_2382
TonB dependent receptor.
       0.465
GLE_4115
Sulfatase.
 
  
  0.439
GLE_1121
Phytase precursor.
    
 0.418
GLE_4944
Phytase precursor.
    
 0.418
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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