STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2417TonB-dependent siderophore receptor. (738 aa)    
Predicted Functional Partners:
GLE_2421
PepSY-associated TM helix.
 
     0.863
GLE_0614
TonB family C-terminal domain.
  
 
 0.787
GLE_2946
TonB family C-terminal domain.
   
 
 0.747
GLE_2979
TonB family C-terminal domain.
   
 
 0.747
GLE_2980
TonB family C-terminal domain.
   
 
 0.747
GLE_3411
TonB family C-terminal domain.
   
 
 0.747
GLE_4556
TonB family domain protein.
   
 
 0.747
GLE_5331
TonB family C-terminal domain.
   
 
 0.747
GLE_5350
TonB family C-terminal domain; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
 
 0.747
GLE_2418
Hypothetical protein.
       0.697
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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