STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2433Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)    
Predicted Functional Partners:
GLE_4894
Amino acid adenylation domain protein.
 
 0.971
GLE_0544
Linear gramicidin synthetase subunit C.
 
  
  0.907
lgrB
Linear gramicidin synthetase subunit B.
 
  
  0.907
GLE_0546
Linear gramicidin synthetase subunit D.
 
  
  0.907
GLE_2959
Linear gramicidin synthetase subunit D.
 
  
  0.907
GLE_3997
Linear gramicidin synthetase subunit D.
 
      0.885
GLE_1848
Condensation/amino acid adenylation/thioesterase domain protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
  0.884
gltB
Glutamine amidotransferases class-II/glutamate synthase.
     
 0.726
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.689
GLE_2434
Transcriptional regulator, AraC family.
 
     0.678
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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