Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_2447 | GLE_2449 | GLE_2447 | GLE_2449 | WspR. | Histidine kinase. | 0.987 |
GLE_2447 | GLE_2450 | GLE_2447 | GLE_2450 | WspR. | CheW domain protein. | 0.989 |
GLE_2447 | GLE_2451 | GLE_2447 | GLE_2451 | WspR. | cheR-type methyltransferase. | 0.905 |
GLE_2447 | GLE_2453 | GLE_2447 | GLE_2453 | WspR. | Methyl-accepting chemotaxis protein (MCP) signaling domain. | 0.989 |
GLE_2447 | GLE_3948 | GLE_2447 | GLE_3948 | WspR. | Signal transduction histidine kinase. | 0.535 |
GLE_2447 | GLE_3952 | GLE_2447 | GLE_3952 | WspR. | Signal transduction histidine kinase. | 0.475 |
GLE_2447 | cheB | GLE_2447 | GLE_2448 | WspR. | Protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.973 |
GLE_2447 | cheW | GLE_2447 | GLE_2452 | WspR. | Purine-binding chemotaxis protein Chew. | 0.988 |
GLE_2447 | pilJ | GLE_2447 | GLE_3959 | WspR. | Type IV pilus assembly protein. | 0.717 |
GLE_2449 | GLE_2447 | GLE_2449 | GLE_2447 | Histidine kinase. | WspR. | 0.987 |
GLE_2449 | GLE_2450 | GLE_2449 | GLE_2450 | Histidine kinase. | CheW domain protein. | 0.999 |
GLE_2449 | GLE_2451 | GLE_2449 | GLE_2451 | Histidine kinase. | cheR-type methyltransferase. | 0.998 |
GLE_2449 | GLE_2453 | GLE_2449 | GLE_2453 | Histidine kinase. | Methyl-accepting chemotaxis protein (MCP) signaling domain. | 0.999 |
GLE_2449 | GLE_3948 | GLE_2449 | GLE_3948 | Histidine kinase. | Signal transduction histidine kinase. | 0.709 |
GLE_2449 | GLE_3949 | GLE_2449 | GLE_3949 | Histidine kinase. | Hypothetical protein. | 0.590 |
GLE_2449 | GLE_3952 | GLE_2449 | GLE_3952 | Histidine kinase. | Signal transduction histidine kinase. | 0.713 |
GLE_2449 | cheB | GLE_2449 | GLE_2448 | Histidine kinase. | Protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
GLE_2449 | cheW | GLE_2449 | GLE_2452 | Histidine kinase. | Purine-binding chemotaxis protein Chew. | 0.999 |
GLE_2449 | pilJ | GLE_2449 | GLE_3959 | Histidine kinase. | Type IV pilus assembly protein. | 0.999 |
GLE_2450 | GLE_2447 | GLE_2450 | GLE_2447 | CheW domain protein. | WspR. | 0.989 |
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