STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2479Hypothetical protein. (147 aa)    
Predicted Functional Partners:
GLE_0227
Tetratricopeptide repeat domain protein.
  
     0.565
GLE_4847
Tetratricopeptide repeat domain protein.
  
     0.521
GLE_0778
Extracellular ribonuclease precursor.
  
     0.509
GLE_2469
Tetracenomycin polyketide synthesis protein.
  
     0.474
GLE_0364
Bacterial membrane flanked domain.
 
    0.461
GLE_0722
Bacterioferritin-associated ferredoxin.
  
     0.451
GLE_4370
Endoribonuclease L-PSP family protein.
  
     0.448
cysG
Putative uroporphyrin-III C-methyltransferase.
  
     0.444
GLE_1381
RNA methylase family; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.441
GLE_0869
Transporter, cation channel family.
  
     0.436
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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