STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgrLinear gramicidin synthetase subunit C. (6315 aa)    
Predicted Functional Partners:
GLE_4894
Amino acid adenylation domain protein.
 
0.964
GLE_2497
mbtH family protein.
 
 
  0.896
GLE_2494
Polyketide synthase pksM.
 
    
0.833
GLE_2492
Sulfotransferase.
 
     0.800
lgrE
Linear gramicidin dehydrogenase LgrE.
  
  
  0.782
GLE_2555
Thioesterase domain.
  
  
  0.781
GLE_4699
Peptide synthetase.
  
 
  0.776
GLE_3677
MbtH family protein.
  
 
  0.771
sfp-2
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
    0.743
GLE_2560
Amino acid adenylation domain protein.
 
0.737
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.