Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GLE_2495Beta-ketoacyl synthase/short chain dehydrogenase/methyltransferase domain. (3563 aa)    
Predicted Functional Partners:
GLE_2500
Malonyl CoA-acyl carrier protein transacylase.
  
  0.988
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
  
  0.971
GLE_4894
Amino acid adenylation domain protein.
 0.943
GLE_1691
Malonyl CoA-acyl carrier protein transacylase.
 
  
  0.925
GLE_2497
mbtH family protein.
 
  0.918
GLE_0544
Linear gramicidin synthetase subunit C.
 
     0.917
lgrB
Linear gramicidin synthetase subunit B.
 
     0.915
GLE_2560
Amino acid adenylation domain protein.
 
 
 0.863
GLE_1885
Malonyl CoA-acyl carrier protein transacylase.
 
  0.839
GLE_2559
Amino acid adenylation domain protein.
  
 
  0.800
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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