STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2501Polysaccharide deacetylase. (317 aa)    
Predicted Functional Partners:
GLE_2502
ABC transporter, ATP-binding protein.
       0.773
GLE_2503
Aryl-alcohol dehydrogenase.
       0.762
GLE_4029
Glycosyltransferase family 36.
  
 
 0.686
GLE_2500
Malonyl CoA-acyl carrier protein transacylase.
       0.594
pgaC
Glycosyl transferase, group 2 family protein.
 
 
 0.579
GLE_2504
Efflux ABC transporter, permease protein.
       0.562
GLE_2505
Efflux ABC transporter, permease protein.
       0.551
GLE_2495
Beta-ketoacyl synthase/short chain dehydrogenase/methyltransferase domain.
       0.520
GLE_2496
Hypothetical protein.
       0.520
GLE_2497
mbtH family protein.
       0.520
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.