STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2503Aryl-alcohol dehydrogenase. (309 aa)    
Predicted Functional Partners:
GLE_2501
Polysaccharide deacetylase.
       0.762
GLE_2502
ABC transporter, ATP-binding protein.
       0.762
GLE_2495
Beta-ketoacyl synthase/short chain dehydrogenase/methyltransferase domain.
   
  0.587
GLE_2500
Malonyl CoA-acyl carrier protein transacylase.
       0.586
dkgB
2,5-diketo-d-gluconic acid reductase B.
 
0.571
GLE_2504
Efflux ABC transporter, permease protein.
       0.570
GLE_2505
Efflux ABC transporter, permease protein.
       0.559
GLE_2498
Hydrolase, alpha/beta fold family.
   
   0.535
GLE_2496
Hypothetical protein.
       0.514
GLE_2497
mbtH family protein.
       0.514
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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