Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2504Efflux ABC transporter, permease protein. (382 aa)    
Predicted Functional Partners:
GLE_2502
ABC transporter, ATP-binding protein.
 
  0.934
GLE_4463
ABC transporter, ATP-binding protein.
 
  0.887
GLE_2505
Efflux ABC transporter, permease protein.
 
    
0.841
GLE_4462
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
   0.805
GLE_4465
Efflux ABC transporter, permease protein.
 
     0.790
GLE_0699
ABC transporter.
 
  0.649
GLE_3932
ABC transporter, ATP-binding protein.
 
  0.588
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
   
 0.583
GLE_4209
ABC transporter, ATP-binding protein.
  
  0.576
GLE_2503
Aryl-alcohol dehydrogenase.
       0.570
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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