STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2508Hydrolase, alpha/beta fold family. (262 aa)    
Predicted Functional Partners:
GLE_2509
Flavin-dependent oxidoreductase.
     0.910
GLE_0232
Hydrolase, alpha/beta hydrolase fold family protein.
  
     0.756
GLE_0412
Hydrolase, alpha/beta hydrolase fold family protein.
  
     0.735
GLE_2498
Hydrolase, alpha/beta fold family.
  
     0.704
dmpD
2-hydroxymuconic semialdehyde hydrolase.
  
     0.672
GLE_1847
Hydrolase, alpha/beta fold family protein.
  
     0.665
GLE_0117
Hydrolase, alpha/beta fold family.
  
     0.609
bioH
Putative pimeloyl-BioC--CoA transferase BioH; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.
  
     0.577
GLE_4077
Hydrolase, alpha/beta fold family protein.
  
     0.572
GLE_4894
Amino acid adenylation domain protein.
   
 0.567
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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