Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gluABeta glucanase A. (345 aa)    
Predicted Functional Partners:
gluB
Glucanase B.
  
 
 0.752
GLE_5129
Glycosyl hydrolase, family 3.
  
  
  0.722
GLE_2523
Beta-glucosidase.
 
  
  0.706
GLE_2517
ABC transporter, ATP-binding protein.
       0.605
GLE_2459
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  0.568
GLE_3663
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  0.568
chiA1
Chitinase A.
  
  
 0.564
GLE_3686
Hypothetical protein.
  
     0.520
GLE_0415
YcaO-like family.
  
   
 0.461
GLE_4789
GDSL-like Lipase/Acylhydrolase.
  
  0.460
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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