Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0544 | GLE_0546 | GLE_0544 | GLE_0546 | Linear gramicidin synthetase subunit C. | Linear gramicidin synthetase subunit D. | 0.520 |
GLE_0544 | GLE_1851 | GLE_0544 | GLE_1851 | Linear gramicidin synthetase subunit C. | AMP-binding enzyme. | 0.941 |
GLE_0544 | GLE_2519 | GLE_0544 | GLE_2519 | Linear gramicidin synthetase subunit C. | Luciferase-like monooxygenase. | 0.915 |
GLE_0544 | GLE_2560 | GLE_0544 | GLE_2560 | Linear gramicidin synthetase subunit C. | Amino acid adenylation domain protein. | 0.713 |
GLE_0544 | GLE_4894 | GLE_0544 | GLE_4894 | Linear gramicidin synthetase subunit C. | Amino acid adenylation domain protein. | 0.961 |
GLE_0544 | hemL | GLE_0544 | GLE_0873 | Linear gramicidin synthetase subunit C. | Glutamate-1-semialdehyde-2,1-aminomutase. | 0.900 |
GLE_0544 | lgrB | GLE_0544 | GLE_0545 | Linear gramicidin synthetase subunit C. | Linear gramicidin synthetase subunit B. | 0.782 |
GLE_0546 | GLE_0544 | GLE_0546 | GLE_0544 | Linear gramicidin synthetase subunit D. | Linear gramicidin synthetase subunit C. | 0.520 |
GLE_0546 | GLE_1851 | GLE_0546 | GLE_1851 | Linear gramicidin synthetase subunit D. | AMP-binding enzyme. | 0.916 |
GLE_0546 | GLE_2519 | GLE_0546 | GLE_2519 | Linear gramicidin synthetase subunit D. | Luciferase-like monooxygenase. | 0.900 |
GLE_0546 | GLE_2560 | GLE_0546 | GLE_2560 | Linear gramicidin synthetase subunit D. | Amino acid adenylation domain protein. | 0.731 |
GLE_0546 | GLE_4894 | GLE_0546 | GLE_4894 | Linear gramicidin synthetase subunit D. | Amino acid adenylation domain protein. | 0.965 |
GLE_0546 | hemL | GLE_0546 | GLE_0873 | Linear gramicidin synthetase subunit D. | Glutamate-1-semialdehyde-2,1-aminomutase. | 0.846 |
GLE_0546 | lgrB | GLE_0546 | GLE_0545 | Linear gramicidin synthetase subunit D. | Linear gramicidin synthetase subunit B. | 0.515 |
GLE_1848 | GLE_1851 | GLE_1848 | GLE_1851 | Condensation/amino acid adenylation/thioesterase domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | AMP-binding enzyme. | 0.920 |
GLE_1848 | GLE_2519 | GLE_1848 | GLE_2519 | Condensation/amino acid adenylation/thioesterase domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Luciferase-like monooxygenase. | 0.921 |
GLE_1848 | GLE_2560 | GLE_1848 | GLE_2560 | Condensation/amino acid adenylation/thioesterase domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Amino acid adenylation domain protein. | 0.734 |
GLE_1848 | GLE_4894 | GLE_1848 | GLE_4894 | Condensation/amino acid adenylation/thioesterase domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Amino acid adenylation domain protein. | 0.965 |
GLE_1848 | hemL | GLE_1848 | GLE_0873 | Condensation/amino acid adenylation/thioesterase domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Glutamate-1-semialdehyde-2,1-aminomutase. | 0.659 |
GLE_1851 | GLE_0544 | GLE_1851 | GLE_0544 | AMP-binding enzyme. | Linear gramicidin synthetase subunit C. | 0.941 |
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