STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2534Kinase, pfkB family protein. (332 aa)    
Predicted Functional Partners:
GLE_2535
Transcriptional regulatory protein.
 
  
 0.868
GLE_2533
Transporter, major facilitator family.
 
     0.835
GLE_2532
TonB-dependent receptor.
 
     0.709
rbsK-2
Kinase, pfkB family protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
     0.676
GLE_2248
Oxidoreductase, zinc-binding dehydrogenase family/NAD-binding Rossmann fold.
  
 
 0.659
GLE_2608
AP endonuclease, family 2.
 
 
 0.652
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.639
GLE_4072
Transporter, monovalent cation:proton antiporter-2 (CPA2) family.
  
  
  0.636
GLE_0924
Inosine-uridine preferring nucleoside hydrolase.
 
 
 0.629
GLE_2609
Oxidoreductase family, NAD-binding Rossmann fold domain protein.
 
 
  0.628
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.