STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2535Transcriptional regulatory protein. (416 aa)    
Predicted Functional Partners:
GLE_2534
Kinase, pfkB family protein.
 
  
 0.868
GLE_4340
Hypothetical protein; Belongs to the MtfA family.
    
   0.843
GLE_3657
N-acetyl-D-glucosamine kinase (GlcNAc kinase).
 
     0.789
GLE_2533
Transporter, major facilitator family.
 
  
 0.704
manA
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.688
GLE_2536
Glycosyl hydrolase, family 9.
 
     0.666
GLE_2532
TonB-dependent receptor.
 
     0.642
GLE_2608
AP endonuclease, family 2.
 
  
 0.636
GLE_3654
Glycosyl hydrolase, family 31.
 
 
 0.633
GLE_4029
Glycosyltransferase family 36.
    
 0.618
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.