STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2544Heme oxygenase. (197 aa)    
Predicted Functional Partners:
GLE_2545
TonB-dependent receptor.
 
     0.942
GLE_0617
TonB-dependent receptor.
 
   
 0.751
GLE_2543
Membrane protein.
 
     0.739
GLE_2540
TonB family C-terminal domain.
 
     0.600
GLE_2546
Hypothetical protein.
       0.564
exbB
TonB-system energizer exbB.
       0.492
exbD
TonB system transport protein exbD.
       0.489
GLE_3819
PAS/GAF domain protein.
 
     0.485
GLE_5026
TonB-dependent siderophore receptor.
  
     0.433
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.