STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2562Peptidase, M28 family. (757 aa)    
Predicted Functional Partners:
GLE_2557
Amino acid adenylation domain protein.
       0.572
GLE_2558
Amino acid adenylation domain protein.
       0.572
GLE_2559
Amino acid adenylation domain protein.
       0.572
GLE_2560
Amino acid adenylation domain protein.
       0.572
yojl
ABC transporter ATP-binding protein yojI.
       0.572
GLE_1617
Phosphoglycerate mutase family protein.
  
     0.554
GLE_0026
Hypothetical protein.
    
  0.473
GLE_2556
Taurine catabolism dioxygenase TauD/TfdA.
       0.431
sodC
Superoxide dismutase, Cu-Zn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
   
 0.420
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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