STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2588Phosphoprotein phosphatase. (252 aa)    
Predicted Functional Partners:
tkB
Transketolase.
   
 0.972
GLE_2589
Serine/threonine kinase family protein.
 
 0.971
icmF-2
Type VI secretion protein IcmF.
 
 
 0.941
GLE_2587
Type VI secretion-associated protein, BMA_A0400 family.
 
 
 0.937
GLE_2583
Type VI secretion system FHA domain protein.
 
     0.931
tssK-2
Type VI secretion protein, VC_A0114 family.
 
 
  0.930
GLE_2585
Type VI secretion system OmpA/MotB family protein.
 
    0.924
GLE_3449
Protein kinase domain.
 
 0.880
pkn2-2
Serine/threonine-protein kinase Pkn2.
 
 0.875
GLE_0677
Dihydrolipoyl dehydrogenase.
  
 0.872
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.