STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolEInosose dehydratase. (350 aa)    
Predicted Functional Partners:
GLE_2609
Oxidoreductase family, NAD-binding Rossmann fold domain protein.
 
 
 0.956
GLE_2248
Oxidoreductase, zinc-binding dehydrogenase family/NAD-binding Rossmann fold.
  
 
 0.844
GLE_2608
AP endonuclease, family 2.
 
     0.839
GLE_2610
Transporter, major facilitator family.
 
  
 0.815
GLE_2604
GMC oxidoreductase family protein.
 
     0.747
GLE_2606
Hypothetical protein.
 
     0.717
GLE_2603
Xylose isomerase; Belongs to the hyi family.
 
  
  0.698
GLE_2525
Oxidoreductase.
 
 
 0.669
GLE_4614
Oxidoreductase family, NAD-binding Rossmann fold.
 
 
 0.666
GLE_2605
Tat (twin-arginine translocation) pathway signal sequence.
 
     0.649
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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