Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
iolEInosose dehydratase. (350 aa)    
Predicted Functional Partners:
GLE_2609
Oxidoreductase family, NAD-binding Rossmann fold domain protein.
 
 
 0.920
GLE_2608
AP endonuclease, family 2.
 
     0.848
GLE_2610
Transporter, major facilitator family.
 
  
 0.828
GLE_2604
GMC oxidoreductase family protein.
 
     0.752
GLE_2606
Hypothetical protein.
 
     0.719
GLE_2248
Oxidoreductase, zinc-binding dehydrogenase family/NAD-binding Rossmann fold.
  
 
 0.713
pheA
Chorismate mutase/prephenate dehydratase/ACT domain.
     
  0.674
GLE_2603
Xylose isomerase; Belongs to the hyi family.
 
  
  0.669
GLE_2605
Tat (twin-arginine translocation) pathway signal sequence.
 
     0.651
GLE_2612
Transcriptional regulator, LacI family.
 
    0.604
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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