STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhbE2,3-dihydroxybenzoate-AMP ligase. (552 aa)    
Predicted Functional Partners:
GLE_2622
Isochorismatase.
  
  0.993
GLE_2621
Condensation domain protein.
 
  0.989
menF
Menaquinone-specific isochorismate synthase.
  
  0.959
entA
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase.
 
 
  0.941
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
   
  0.891
GLE_4894
Amino acid adenylation domain protein.
 
0.820
GLE_5440
4'-phosphopantetheinyl transferase superfamily; Belongs to the P-Pant transferase superfamily.
  
  
  0.761
GLE_2620
Siderophore-interacting FAD-binding domain protein.
 
     0.723
GLE_3677
MbtH family protein.
  
  0.687
GLE_2497
mbtH family protein.
  
  0.623
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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