STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2740Alpha-2-macroglobulin family N- region; Protects the bacterial cell from host peptidases. (1633 aa)    
Predicted Functional Partners:
pbpC-2
Penicillin-binding protein 1C.
   
 0.919
GLE_1749
Peptidase, families S8 and S53.
    
  0.826
pbpC
Penicillin-binding protein 1C.
   
 0.782
GLE_2739
Hypothetical protein.
       0.773
GLE_0976
Hypothetical protein.
  
    0.542
GLE_2738
Lipoprotein.
       0.510
GLE_1262
Nuclear protein SET.
    
  0.499
GLE_1667
Metallo-beta-lactamase domain protein.
  
     0.487
GLE_5000
Hypothetical protein.
  
    0.469
GLE_5001
Hypothetical protein.
  
     0.438
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.