Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GLE_2740Alpha-2-macroglobulin family N- region; Protects the bacterial cell from host peptidases. (1633 aa)    
Predicted Functional Partners:
pbpC-2
Penicillin-binding protein 1C.
   
 0.923
pbpC
Penicillin-binding protein 1C.
   
 0.797
GLE_2739
Hypothetical protein.
       0.773
GLE_0976
Hypothetical protein.
  
    0.578
nrdR
Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
    
   0.530
GLE_0188
Hypothetical protein.
  
    0.517
GLE_2738
Lipoprotein.
       0.510
GLE_1667
Metallo-beta-lactamase domain protein.
  
     0.487
GLE_5000
Hypothetical protein.
  
    0.482
GLE_5001
Hypothetical protein.
  
    0.444
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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