STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgmBBeta-phosphoglucomutase. (1005 aa)    
Predicted Functional Partners:
amyA
Cyclomaltodextrin glucanotransferase.
 
 
 0.875
GLE_0338
Alpha,alpha-phosphotrehalase.
 
 
 0.864
otsA
Alpha,alpha-trehalose-phosphate synthase.
    
 0.817
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.783
GLE_2765
TonB-dependent receptor.
 
     0.727
GLE_2778
F5/8 type C domain.
     
 0.715
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
 
  
 0.700
hisB
Histidine biosynthesis bifunctional protein hisB; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
    
 0.695
iam
Isoamylase precursor; Belongs to the glycosyl hydrolase 13 family.
    
 0.664
GLE_2766
Transporter, major facilitator family.
 
     0.664
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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