Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pgmBBeta-phosphoglucomutase. (1005 aa)    
Predicted Functional Partners:
GLE_4894
Amino acid adenylation domain protein.
     
 0.895
otsA
Alpha,alpha-trehalose-phosphate synthase.
    
 0.887
amyA
Cyclomaltodextrin glucanotransferase.
 
 
 0.885
GLE_0338
Alpha,alpha-phosphotrehalase.
 
 
 0.875
GLE_2778
F5/8 type C domain.
     
 0.842
GLE_1885
Malonyl CoA-acyl carrier protein transacylase.
     
  0.797
fghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
     
  0.797
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.761
GLE_2765
TonB-dependent receptor.
 
     0.728
iam
Isoamylase precursor; Belongs to the glycosyl hydrolase 13 family.
    
 0.720
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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