Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_2778 | GLE_2779 | GLE_2778 | GLE_2779 | F5/8 type C domain. | ABC transporter, permease protein. | 0.762 |
GLE_2778 | GLE_2780 | GLE_2778 | GLE_2780 | F5/8 type C domain. | ABC transporter, permease protein. | 0.782 |
GLE_2778 | GLE_2781 | GLE_2778 | GLE_2781 | F5/8 type C domain. | Bacterial extracellular solute-binding protein. | 0.858 |
GLE_2778 | GLE_2782 | GLE_2778 | GLE_2782 | F5/8 type C domain. | Hypothetical protein. | 0.649 |
GLE_2778 | GLE_2897 | GLE_2778 | GLE_2897 | F5/8 type C domain. | Hypothetical protein. | 0.668 |
GLE_2778 | GLE_4177 | GLE_2778 | GLE_4177 | F5/8 type C domain. | General secretion pathway protein J. | 0.650 |
GLE_2778 | GLE_4269 | GLE_2778 | GLE_4269 | F5/8 type C domain. | HAD-superfamily hydrolase, subfamily IB. | 0.624 |
GLE_2778 | amyA | GLE_2778 | GLE_0342 | F5/8 type C domain. | Cyclomaltodextrin glucanotransferase. | 0.583 |
GLE_2778 | otsA | GLE_2778 | GLE_3709 | F5/8 type C domain. | Alpha,alpha-trehalose-phosphate synthase. | 0.588 |
GLE_2778 | pgmB | GLE_2778 | GLE_2764 | F5/8 type C domain. | Beta-phosphoglucomutase. | 0.715 |
GLE_2779 | GLE_2778 | GLE_2779 | GLE_2778 | ABC transporter, permease protein. | F5/8 type C domain. | 0.762 |
GLE_2779 | GLE_2780 | GLE_2779 | GLE_2780 | ABC transporter, permease protein. | ABC transporter, permease protein. | 0.999 |
GLE_2779 | GLE_2781 | GLE_2779 | GLE_2781 | ABC transporter, permease protein. | Bacterial extracellular solute-binding protein. | 0.999 |
GLE_2779 | GLE_2782 | GLE_2779 | GLE_2782 | ABC transporter, permease protein. | Hypothetical protein. | 0.822 |
GLE_2779 | amyA | GLE_2779 | GLE_0342 | ABC transporter, permease protein. | Cyclomaltodextrin glucanotransferase. | 0.401 |
GLE_2779 | pgmB | GLE_2779 | GLE_2764 | ABC transporter, permease protein. | Beta-phosphoglucomutase. | 0.461 |
GLE_2780 | GLE_2778 | GLE_2780 | GLE_2778 | ABC transporter, permease protein. | F5/8 type C domain. | 0.782 |
GLE_2780 | GLE_2779 | GLE_2780 | GLE_2779 | ABC transporter, permease protein. | ABC transporter, permease protein. | 0.999 |
GLE_2780 | GLE_2781 | GLE_2780 | GLE_2781 | ABC transporter, permease protein. | Bacterial extracellular solute-binding protein. | 0.999 |
GLE_2780 | GLE_2782 | GLE_2780 | GLE_2782 | ABC transporter, permease protein. | Hypothetical protein. | 0.837 |
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