STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2780ABC transporter, permease protein. (292 aa)    
Predicted Functional Partners:
GLE_2779
ABC transporter, permease protein.
 0.999
GLE_2781
Bacterial extracellular solute-binding protein.
 0.999
ugpC
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.998
GLE_2782
Hypothetical protein.
 
     0.837
GLE_2778
F5/8 type C domain.
 
     0.782
potG
Putrescine transport ATP-binding protein potG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.655
GLE_2783
Hypothetical protein.
       0.572
pgmB
Beta-phosphoglucomutase.
  
  
 0.559
amyA
Cyclomaltodextrin glucanotransferase.
 
  
 0.544
GLE_0338
Alpha,alpha-phosphotrehalase.
  
 0.522
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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