STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2796Hydrolase. (265 aa)    
Predicted Functional Partners:
gltB
Glutamine amidotransferases class-II/glutamate synthase.
    
 0.913
mqo
Malate:quinone oxidoreductase.
  
  
  0.898
GLE_3747
Aminotransferase class I and II.
  
 
  0.883
GLE_2691
Bacterial NAD-glutamate dehydrogenase family protein.
     
 0.873
GLE_0070
Glutamate synthase, small subunit.
    
  0.872
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
 0.865
gltA
Citrate (Si)-synthase; Belongs to the citrate synthase family.
     
  0.860
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
     
  0.860
GLE_1654
Isocitrate/isopropylmalate dehydrogenase.
     
  0.860
sucA
Oxoglutarate dehydrogenase, E1 component.
     
  0.860
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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