STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2837Cysteine dioxygenase type I. (198 aa)    
Predicted Functional Partners:
metX
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-serine, forming succinyl-L-serine.
       0.792
GLE_1714
Hypothetical protein.
  
     0.616
GLE_4171
Hypothetical protein.
  
     0.594
ccmF
Cytochrome c-type biogenesis protein.
       0.575
dsbE
Thiol:disulfide interchange protein dsbE.
       0.575
GLE_2834
Tetratricopeptide repeat.
       0.575
GLE_1066
Peptidase.
  
     0.574
GLE_2838
Hypothetical protein.
       0.536
ccmH
Cytochrome C biogenesis protein ccmH; Possible subunit of a heme lyase.
       0.521
GLE_2835
Hypothetical protein.
       0.519
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.