Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0462 | GLE_2838 | GLE_0462 | GLE_2838 | Transcriptional regulator, PadR family. | Hypothetical protein. | 0.442 |
GLE_2837 | GLE_2838 | GLE_2837 | GLE_2838 | Cysteine dioxygenase type I. | Hypothetical protein. | 0.536 |
GLE_2837 | GLE_2839 | GLE_2837 | GLE_2839 | Cysteine dioxygenase type I. | Hypothetical protein. | 0.490 |
GLE_2837 | metX | GLE_2837 | GLE_2836 | Cysteine dioxygenase type I. | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-serine, forming succinyl-L-serine. | 0.792 |
GLE_2838 | GLE_0462 | GLE_2838 | GLE_0462 | Hypothetical protein. | Transcriptional regulator, PadR family. | 0.442 |
GLE_2838 | GLE_2837 | GLE_2838 | GLE_2837 | Hypothetical protein. | Cysteine dioxygenase type I. | 0.536 |
GLE_2838 | GLE_2839 | GLE_2838 | GLE_2839 | Hypothetical protein. | Hypothetical protein. | 0.741 |
GLE_2838 | metX | GLE_2838 | GLE_2836 | Hypothetical protein. | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-serine, forming succinyl-L-serine. | 0.509 |
GLE_2839 | GLE_2837 | GLE_2839 | GLE_2837 | Hypothetical protein. | Cysteine dioxygenase type I. | 0.490 |
GLE_2839 | GLE_2838 | GLE_2839 | GLE_2838 | Hypothetical protein. | Hypothetical protein. | 0.741 |
GLE_2839 | metX | GLE_2839 | GLE_2836 | Hypothetical protein. | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-serine, forming succinyl-L-serine. | 0.490 |
metX | GLE_2837 | GLE_2836 | GLE_2837 | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-serine, forming succinyl-L-serine. | Cysteine dioxygenase type I. | 0.792 |
metX | GLE_2838 | GLE_2836 | GLE_2838 | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-serine, forming succinyl-L-serine. | Hypothetical protein. | 0.509 |
metX | GLE_2839 | GLE_2836 | GLE_2839 | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-serine, forming succinyl-L-serine. | Hypothetical protein. | 0.490 |