Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phaCpoly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. (356 aa)    
Predicted Functional Partners:
GLE_2859
PHA synthase subunit.
 
  
 0.995
phbB
acetoacetyl-CoA reductase.
  
  
 0.947
phbB-2
acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.944
phbB-3
acetoacetyl-CoA reductase.
  
  
 0.934
phaZ
Polyhydroxyalkanoate depolymerase, intracellular.
 
  
 0.922
fadJ
Fatty acid oxidation complex subunit alpha.
     
 0.901
phaR
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.832
fadB
3-hydroxyacyl-CoA dehydrogenase.
     
 0.701
maeB
NADP-dependent malic enzyme.
  
 
 0.656
GLE_2855
Hypothetical protein.
       0.555
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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