STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaCpoly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. (356 aa)    
Predicted Functional Partners:
GLE_2859
PHA synthase subunit.
 
  
 0.997
phbB
acetoacetyl-CoA reductase.
  
 
 0.964
phbB-2
acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.962
phbB-3
acetoacetyl-CoA reductase.
  
 
 0.954
phaZ
Polyhydroxyalkanoate depolymerase, intracellular.
 
  
 0.950
fadJ
Fatty acid oxidation complex subunit alpha.
     
 0.935
phaR
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.841
fadB
3-hydroxyacyl-CoA dehydrogenase.
     
 0.720
GLE_2855
Hypothetical protein.
       0.641
GLE_2854
Hypothetical protein.
       0.628
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.