STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2864Sensory box histidine kinase. (1110 aa)    
Predicted Functional Partners:
GLE_0632
Sensory box histidine kinase.
  
 0.968
GLE_0164
Sensory box histidine kinase.
  
 0.953
putA
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.900
GLE_0159
Transcriptional regulator, LuxR family.
 
 
 0.809
tkB
Transketolase.
   
 0.805
GLE_3744
Transcriptional regulator, LuxR/UhpA family.
 
 
 0.791
GLE_2862
Two component transcriptional regulator, LuxR family.
 
 
 0.782
GLE_5310
Sensory box histidine kinase.
  
 0.719
GLE_2449
Histidine kinase.
   
 0.717
GLE_0894
Sensory box protein.
  
 0.716
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.