STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2866Citrate transporter. (465 aa)    
Predicted Functional Partners:
GLE_4228
3-oxoacid CoA-transferase, A subunit family.
    0.779
scoB
succinyl-CoA:3-ketoacid-coenzyme A transferase, subunit B.
     0.763
GLE_2865
TonB-dependent receptor.
 
     0.591
GLE_0058
Short chain fatty acid transporter, putative.
 
   
 0.498
GLE_2867
CalU2.
       0.451
GLE_2868
CalU3.
       0.451
GLE_2869
CalU4.
       0.451
GLE_2870
Coproporphyrinogen III oxidase family protein.
       0.451
GLE_2871
CalU5.
       0.451
gnd
6-phosphogluconate dehydrogenase (decarboxylating).
  
  
 0.450
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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