Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0133 | GLE_0800 | GLE_0133 | GLE_0800 | Hypothetical protein. | O-Antigen Polymerase. | 0.730 |
GLE_0133 | GLE_2701 | GLE_0133 | GLE_2701 | Hypothetical protein. | Nucleoprotein/polynucleotide-associated enzyme. | 0.622 |
GLE_0133 | GLE_2859 | GLE_0133 | GLE_2859 | Hypothetical protein. | PHA synthase subunit. | 0.656 |
GLE_0133 | GLE_2875 | GLE_0133 | GLE_2875 | Hypothetical protein. | Hypothetical protein. | 0.728 |
GLE_0133 | GLE_2928 | GLE_0133 | GLE_2928 | Hypothetical protein. | Hypothetical protein. | 0.472 |
GLE_0133 | gvcR | GLE_0133 | GLE_3184 | Hypothetical protein. | Glycine cleavage system transcriptional repressor. | 0.504 |
GLE_0133 | zipA | GLE_0133 | GLE_2757 | Hypothetical protein. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.626 |
GLE_0800 | GLE_0133 | GLE_0800 | GLE_0133 | O-Antigen Polymerase. | Hypothetical protein. | 0.730 |
GLE_0800 | GLE_2701 | GLE_0800 | GLE_2701 | O-Antigen Polymerase. | Nucleoprotein/polynucleotide-associated enzyme. | 0.674 |
GLE_0800 | GLE_2859 | GLE_0800 | GLE_2859 | O-Antigen Polymerase. | PHA synthase subunit. | 0.560 |
GLE_0800 | GLE_2875 | GLE_0800 | GLE_2875 | O-Antigen Polymerase. | Hypothetical protein. | 0.734 |
GLE_0800 | GLE_2928 | GLE_0800 | GLE_2928 | O-Antigen Polymerase. | Hypothetical protein. | 0.466 |
GLE_0800 | zipA | GLE_0800 | GLE_2757 | O-Antigen Polymerase. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.584 |
GLE_0929 | GLE_1573 | GLE_0929 | GLE_1573 | Hypothetical protein. | Hypothetical protein. | 0.471 |
GLE_0929 | GLE_2859 | GLE_0929 | GLE_2859 | Hypothetical protein. | PHA synthase subunit. | 0.527 |
GLE_0929 | GLE_2875 | GLE_0929 | GLE_2875 | Hypothetical protein. | Hypothetical protein. | 0.701 |
GLE_0929 | gvcR | GLE_0929 | GLE_3184 | Hypothetical protein. | Glycine cleavage system transcriptional repressor. | 0.672 |
GLE_0929 | zipA | GLE_0929 | GLE_2757 | Hypothetical protein. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.439 |
GLE_1098 | GLE_2875 | GLE_1098 | GLE_2875 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.627 |
GLE_1098 | GLE_2928 | GLE_1098 | GLE_2928 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.429 |
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