STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2946TonB family C-terminal domain. (137 aa)    
Predicted Functional Partners:
phhB
Pterin-4-alpha-carbinolamine dehydratase.
       0.873
GLE_2947
Hypothetical protein.
       0.693
GLE_5328
Biopolymer transport exbD2 protein, putative.
  
 
 0.682
exbB-2
Transporter, MotA/TolQ/ExbB proton channel family.
 
 
 0.645
GLE_4092
TonB-dependent receptor.
 
 
   0.622
GLE_0715
TonB-dependent receptor.
 
 
   0.602
GLE_5327
Transport energizing protein, ExbD/TolR family.
  
   0.587
GLE_5329
Transport energizing protein, ExbD/TolR family.
  
 
 0.566
nfuA
Iron-sulfur cluster biosynthesis/NifU-like domain; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
     
 0.555
GLE_2417
TonB-dependent siderophore receptor.
   
   0.553
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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