STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirATwo-component system response regulator, LuxR family. (215 aa)    
Predicted Functional Partners:
GLE_3549
Histidine kinase.
 
  0.863
GLE_5267
Two-component system sensor protein.
  
  0.860
GLE_1578
Histidine kinase.
 
  0.854
GLE_3518
Histidine kinase.
  
  0.853
GLE_4582
Sensor histidine kinase.
  
  0.821
GLE_1142
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.809
GLE_1143
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.809
GLE_0632
Sensory box histidine kinase.
   
 0.774
GLE_0164
Sensory box histidine kinase.
   
 0.764
GLE_3438
Diguanylate cyclase.
  
 0.753
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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