STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2959Linear gramicidin synthetase subunit D. (1535 aa)    
Predicted Functional Partners:
GLE_4894
Amino acid adenylation domain protein.
 
0.965
GLE_2621
Condensation domain protein.
 
 
0.953
GLE_1851
AMP-binding enzyme.
 
     0.944
GLE_2519
Luciferase-like monooxygenase.
 
     0.921
GLE_2433
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.907
fabF
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 
  0.893
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
 
 
 
  0.823
GLE_2500
Malonyl CoA-acyl carrier protein transacylase.
 
   
  0.815
GLE_2495
Beta-ketoacyl synthase/short chain dehydrogenase/methyltransferase domain.
 
     0.770
lgrE
Linear gramicidin dehydrogenase LgrE.
 
  
  0.768
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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