STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2965DoxX. (226 aa)    
Predicted Functional Partners:
GLE_2968
Hypothetical protein.
 
  
 0.847
GLE_2967
AP endonuclease, family 2; Belongs to the UPF0276 family.
 
  
 0.792
GLE_3322
Hypothetical protein.
 
  
 0.747
GLE_3321
UPF0276 protein; Belongs to the UPF0276 family.
 
  
 0.680
GLE_2966
EF hand domain protein.
  
  
 0.572
GLE_2964
Hypothetical protein.
       0.569
GLE_3320
Hypothetical protein.
 
  
 0.524
virB3
VirB3 protein.
   
    0.511
GLE_4833
Hypothetical protein.
 
  
  0.511
pcaC
Gamma-carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
    0.510
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.