STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2965DoxX. (226 aa)    
Predicted Functional Partners:
GLE_2968
Hypothetical protein.
 
  
 0.840
GLE_2967
AP endonuclease, family 2; Belongs to the UPF0276 family.
 
  
 0.805
GLE_3322
Hypothetical protein.
 
  
 0.736
GLE_3321
UPF0276 protein; Belongs to the UPF0276 family.
 
  
 0.700
GLE_2966
EF hand domain protein.
  
  
 0.582
pcaC
Gamma-carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.569
virB3
VirB3 protein.
   
    0.569
GLE_2964
Hypothetical protein.
       0.569
GLE_3320
Hypothetical protein.
 
  
 0.536
virB2
VirB2 protein.
   
    0.534
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.