Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GLE_2992Poly(hydroxyalcanoate) granule associated protein. (196 aa)    
Predicted Functional Partners:
GLE_2991
Phospholipase, patatin family.
 
     0.887
GLE_2988
Hypothetical protein.
 
     0.801
GLE_3001
Tetratricopeptide repeat family protein.
 
 
   0.781
GLE_2997
Transcriptional regulator, TetR family.
 
     0.758
GLE_2635
Acyltransferase, ws/dgat/mgat subfamily.
  
     0.749
GLE_2995
NAD dependent epimerase/dehydratase family.
  
     0.743
scpA
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
   
 
 0.721
GLE_4279
Hypothetical protein.
   
   0.682
GLE_0632
Sensory box histidine kinase.
    
 0.645
pilL
Hpt domain protein; Response regulator receiver domain/histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/CheW-like domain.
 
  
 0.621
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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