STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3055glutaryl-CoA dehydrogenase, (GCD). (387 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein subunit alpha.
 0.989
fadJ
Fatty acid oxidation complex subunit alpha.
 0.988
GLE_2914
3-ketoacyl-CoA thiolase A; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.975
fadB
3-hydroxyacyl-CoA dehydrogenase.
 
 0.936
GLE_0677
Dihydrolipoyl dehydrogenase.
  
 0.929
GLE_2346
acyl-CoA dehydrogenase.
 
  
 
0.924
sucB
Dihydrolipoyllysine-residue succinyltransferase, E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
    
  0.916
lpdA
Dihydrolipoyl dehydrogenase.
   
 
  0.905
GLE_1096
acyl-CoA dehydrogenase, C-terminal domain.
     
 
0.904
etfB
Electron transfer flavoprotein beta subunit.
 
 
 0.881
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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