Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eprA1Extracellular protease. (368 aa)    
Predicted Functional Partners:
nprV
Neutral protease; Extracellular zinc metalloprotease.
  
   
 0.731
nprV-2
Neutral protease; Extracellular zinc metalloprotease.
  
   
 0.701
GLE_3835
Peptidase, M28 family.
  
     0.637
GLE_3837
Peptidase, M28 family/proprotein convertase P-domain protein.
  
     0.604
GLE_1165
Rhs family protein.
  
     0.553
GLE_3612
Metallo-beta-lactamase domain protein.
  
     0.550
GLE_1384
mutT/nudix family protein.
  
  
  0.540
GLE_4313
Nuclease.
  
     0.513
GLE_4692
Rhs family protein.
  
     0.508
GLE_5483
Rhs family protein.
  
     0.508
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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