STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3105Acetyltransferase. (91 aa)    
Predicted Functional Partners:
GLE_1413
NAD dependent epimerase/dehydratase family.
   
    0.730
GLE_3696
General stress protein.
  
    0.702
GLE_2210
NAD dependent epimerase/dehydratase family.
  
    0.646
rluF
Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.
       0.561
rpiA
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.559
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.551
GLE_3106
Hypothetical protein.
       0.545
GLE_2596
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
   
    0.529
GLE_4331
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
   
    0.529
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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