Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0084 | GLE_3106 | GLE_0084 | GLE_3106 | Hypothetical protein. | Hypothetical protein. | 0.644 |
GLE_0084 | dnaK | GLE_0084 | GLE_2232 | Hypothetical protein. | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.571 |
GLE_1966 | GLE_3106 | GLE_1966 | GLE_3106 | dnaK family protein; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.644 |
GLE_3105 | GLE_3106 | GLE_3105 | GLE_3106 | Acetyltransferase. | Hypothetical protein. | 0.545 |
GLE_3106 | GLE_0084 | GLE_3106 | GLE_0084 | Hypothetical protein. | Hypothetical protein. | 0.644 |
GLE_3106 | GLE_1966 | GLE_3106 | GLE_1966 | Hypothetical protein. | dnaK family protein; Belongs to the heat shock protein 70 family. | 0.644 |
GLE_3106 | GLE_3105 | GLE_3106 | GLE_3105 | Hypothetical protein. | Acetyltransferase. | 0.545 |
GLE_3106 | GLE_3107 | GLE_3106 | GLE_3107 | Hypothetical protein. | Hypothetical protein. | 0.572 |
GLE_3106 | dnaK | GLE_3106 | GLE_2232 | Hypothetical protein. | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.644 |
GLE_3107 | GLE_3106 | GLE_3107 | GLE_3106 | Hypothetical protein. | Hypothetical protein. | 0.572 |
dnaK | GLE_0084 | GLE_2232 | GLE_0084 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.571 |
dnaK | GLE_3106 | GLE_2232 | GLE_3106 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.644 |