STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3115Endonuclease/exonuclease/phosphatase family protein. (290 aa)    
Predicted Functional Partners:
sufS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.862
GLE_3114
Lipoprotein.
       0.773
GLE_0837
Transcriptional regulator.
  
     0.603
GLE_4269
HAD-superfamily hydrolase, subfamily IB.
 
  
  0.595
GLE_3113
Zinc carboxypeptidase.
 
     0.519
pgmB
Beta-phosphoglucomutase.
 
  
 0.503
GLE_4286
Diacylglycerol kinase catalytic domain; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.
  
 
  0.450
GLE_5038
Hydrolase, CocE/NonD family.
  
     0.446
GLE_4563
Hypothetical protein.
  
     0.426
GLE_0248
Sporulation and cell division repeat protein.
  
    0.411
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.