Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_1993 | GLE_3164 | GLE_1993 | GLE_3164 | Peptidase, families S8 and S53. | Hypothetical protein. | 0.427 |
GLE_3163 | GLE_3164 | GLE_3163 | GLE_3164 | GumN protein. | Hypothetical protein. | 0.474 |
GLE_3163 | mutL | GLE_3163 | GLE_3165 | GumN protein. | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.474 |
GLE_3164 | GLE_1993 | GLE_3164 | GLE_1993 | Hypothetical protein. | Peptidase, families S8 and S53. | 0.427 |
GLE_3164 | GLE_3163 | GLE_3164 | GLE_3163 | Hypothetical protein. | GumN protein. | 0.474 |
GLE_3164 | GLE_3166 | GLE_3164 | GLE_3166 | Hypothetical protein. | Hypothetical protein. | 0.510 |
GLE_3164 | GLE_3167 | GLE_3164 | GLE_3167 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.468 |
GLE_3164 | mutL | GLE_3164 | GLE_3165 | Hypothetical protein. | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.873 |
GLE_3166 | GLE_3164 | GLE_3166 | GLE_3164 | Hypothetical protein. | Hypothetical protein. | 0.510 |
GLE_3166 | GLE_3167 | GLE_3166 | GLE_3167 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.581 |
GLE_3166 | mutL | GLE_3166 | GLE_3165 | Hypothetical protein. | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.510 |
GLE_3167 | GLE_3164 | GLE_3167 | GLE_3164 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.468 |
GLE_3167 | GLE_3166 | GLE_3167 | GLE_3166 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.581 |
GLE_3167 | mutL | GLE_3167 | GLE_3165 | N-acetylmuramoyl-L-alanine amidase. | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.697 |
mutL | GLE_3163 | GLE_3165 | GLE_3163 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | GumN protein. | 0.474 |
mutL | GLE_3164 | GLE_3165 | GLE_3164 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Hypothetical protein. | 0.873 |
mutL | GLE_3166 | GLE_3165 | GLE_3166 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Hypothetical protein. | 0.510 |
mutL | GLE_3167 | GLE_3165 | GLE_3167 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | N-acetylmuramoyl-L-alanine amidase. | 0.697 |