STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3190Hydrolase, alpha/beta fold family. (285 aa)    
Predicted Functional Partners:
thiD
Phosphomethylpyrimidine kinase.
       0.873
gvcR
Glycine cleavage system transcriptional repressor.
 
     0.601
GLE_0800
O-Antigen Polymerase.
  
     0.595
GLE_3188
Hypothetical protein.
       0.547
GLE_3187
PhoH family protein.
       0.530
GLE_5181
YceI like family; Belongs to the UPF0312 family.
  
     0.525
GLE_5332
Tetratricopeptide repeat domain protein.
  
     0.508
GLE_3731
Hypothetical protein.
  
     0.502
GLE_0103
Protein U domain protein.
  
     0.476
GLE_2875
Hypothetical protein.
  
     0.471
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.