STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3219Oxidoreductase, zinc-binding dehydrogenase family protein. (351 aa)    
Predicted Functional Partners:
GLE_3218
HSAF FAD dependent oxidoreductase.
 
     0.819
GLE_3217
HSAF FAD dependent oxidoreductase.
 
     0.783
GLE_3216
HSAF FAD dependent oxidoreductase.
 
     0.615
GLE_3220
Hypothetical protein.
       0.551
GLE_3215
HSAF non-ribosomal peptide synthetase/polyketide synthase.
       0.532
dkgB
2,5-diketo-d-gluconic acid reductase B.
   
 
 0.489
GLE_1867
Phosphotransferase enzyme family protein.
 
    0.470
GLE_2348
Phosphotransferase enzyme family.
 
    0.428
GLE_3214
Hypothetical protein.
       0.407
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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