STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3237Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (365 aa)    
Predicted Functional Partners:
GLE_3236
AcrB multidrug efflux pump protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.968
GLE_0992
RND superfamily protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.874
mdtC
Multidrug resistance protein mdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.863
GLE_2566
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.857
GLE_0811
RND superfamily protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.808
GLE_5225
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.807
GLE_2937
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.803
GLE_0498
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.775
GLE_4838
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.749
GLE_2936
RND superfamily protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.748
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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