STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3312Phosphate-selective porin O and P. (430 aa)    
Predicted Functional Partners:
GLE_2435
Phosphate-selective porin O and P.
  
     0.641
GLE_1200
Hypothetical protein.
  
     0.575
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.539
GLE_4994
Immunogenic 75 kDa protein PG4.
  
     0.522
GLE_0968
Lipoprotein.
  
     0.519
cysG
Putative uroporphyrin-III C-methyltransferase.
  
     0.506
GLE_1684
Membrane protein.
  
     0.505
GLE_4707
N-acetylmuramoyl-L-alanine amidase.
  
     0.493
GLE_0917
Parallel beta-helix repeat protein.
  
     0.468
GLE_5152
Tetratricopeptide repeat domain protein.
  
     0.465
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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