Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_2338 | GLE_3303 | GLE_2338 | GLE_3303 | Hypothetical protein. | OmpA family. | 0.909 |
GLE_2338 | phoU | GLE_2338 | GLE_3318 | Hypothetical protein. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.444 |
GLE_2338 | pstA | GLE_2338 | GLE_3316 | Hypothetical protein. | Phosphate ABC transporter, permease protein PstA. | 0.979 |
GLE_2338 | pstB | GLE_2338 | GLE_3317 | Hypothetical protein. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.952 |
GLE_2338 | pstC | GLE_2338 | GLE_3315 | Hypothetical protein. | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.978 |
GLE_2338 | pstS | GLE_2338 | GLE_3313 | Hypothetical protein. | Phosphate ABC transporter, phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.932 |
GLE_2338 | pstS-2 | GLE_2338 | GLE_3314 | Hypothetical protein. | Phosphate ABC transporter, phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.932 |
GLE_3303 | GLE_2338 | GLE_3303 | GLE_2338 | OmpA family. | Hypothetical protein. | 0.909 |
GLE_3303 | phoU | GLE_3303 | GLE_3318 | OmpA family. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.672 |
GLE_3303 | pstA | GLE_3303 | GLE_3316 | OmpA family. | Phosphate ABC transporter, permease protein PstA. | 0.969 |
GLE_3303 | pstB | GLE_3303 | GLE_3317 | OmpA family. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.979 |
GLE_3303 | pstC | GLE_3303 | GLE_3315 | OmpA family. | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.951 |
GLE_3303 | pstS | GLE_3303 | GLE_3313 | OmpA family. | Phosphate ABC transporter, phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.914 |
GLE_3303 | pstS-2 | GLE_3303 | GLE_3314 | OmpA family. | Phosphate ABC transporter, phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.914 |
cysN | pstA | GLE_1238 | GLE_3316 | Bifunctional enzyme CysN/cysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Phosphate ABC transporter, permease protein PstA. | 0.761 |
cysN | pstB | GLE_1238 | GLE_3317 | Bifunctional enzyme CysN/cysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.493 |
cysN | pstC | GLE_1238 | GLE_3315 | Bifunctional enzyme CysN/cysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.486 |
modA | pstA | GLE_0955 | GLE_3316 | Molybdate ABC transporter, periplasmic molybdate-binding protein. | Phosphate ABC transporter, permease protein PstA. | 0.622 |
phoR | phoU | GLE_1648 | GLE_3318 | Phosphate regulon sensor kinase PhoR. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.488 |
phoR | pstA | GLE_1648 | GLE_3316 | Phosphate regulon sensor kinase PhoR. | Phosphate ABC transporter, permease protein PstA. | 0.478 |
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