STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_3330Ankyrin repeat-containing exported protein. (283 aa)    
Predicted Functional Partners:
GLE_3329
Hypothetical protein.
       0.773
GLE_2760
Peptidase, M56 family/ankyrin repeat.
  
  
  0.763
tssI-2
Type VI secretion system Vgr family protein.
       0.727
GLE_3332
Hypothetical protein.
       0.727
GLE_0026
Hypothetical protein.
   
 0.726
GLE_5167
Phospholipase accessory protein.
  
     0.720
GLE_3908
Histone deacetylase family.
    
 0.715
GLE_5166
Phospholipase accessory protein.
  
     0.715
GLE_3333
Hypothetical protein.
       0.712
GLE_3334
Hypothetical protein.
       0.712
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.